A B C D E F G H I J K L M N O P Q R S T U V W X Y Z

L

L - Variable in class org.simBio.bio.kuzumoto_et_al_2007.contraction.CrossBridgeLength

half sarcomere length

L - Variable in class org.simBio.bio.kuzumoto_et_al_2007.contraction.IsotonicContraction

L - Variable in class org.simBio.bio.kuzumoto_et_al_2007.contraction.Troponin

L - Variable in class org.simBio.bio.kuzumoto_et_al_2007.molecule.BetaAR_Gs

free ligand concentration

L - Variable in class org.simBio.bio.negroni_lascano_1996.CrossBridge

L - Variable in class org.simBio.bio.negroni_lascano_1996.exp.LChange

muscle length

L - Variable in class org.simBio.bio.negroni_lascano_1996.exp.Model

L - Variable in class org.simBio.bio.negroni_lascano_1996.Troponin

L0 - Static variable in class org.simBio.bio.kuzumoto_et_al_2007.contraction.ParallelElementForce

L0 - Variable in class org.simBio.bio.negroni_lascano_1996.CrossBridge

L0 - Variable in class org.simBio.bio.negroni_lascano_1996.exp.Model

La - Variable in class org.simBio.bio.kuzumoto_et_al_2007.contraction.Troponin

La - Variable in class org.simBio.bio.negroni_lascano_1996.exp.IsotonicContraction

La - Variable in class org.simBio.bio.negroni_lascano_1996.exp.Model

LA - Variable in class org.simBio.bio.takeuchi_et_al_2006.function.Electroneutrality

concentration of intracellular LA [mM]

labelColor - Variable in class org.simBio.sim.analyzer.graph.Axis

axis label colour

labelFont - Variable in class org.simBio.sim.analyzer.graph.Axis

axis label font

labelInitialized - Variable in class org.simBio.sim.analyzer.graph.Axis

for label display

labelLength - Variable in class org.simBio.sim.analyzer.graph.Axis

maximum length of the label string

labels - Static variable in class org.simBio.sim.ps.view.AbstractPlot

labels for z-axis of each evaluation

labelStep - Variable in class org.simBio.sim.analyzer.graph.Axis

label display interval

labelStep - Variable in class org.simBio.sim.analyzer.graph.simple.Axis

LAext - Variable in class org.simBio.bio.terashima_et_al_2006.complex.WaterFlux

concentration of extracellular large anionic compound [mM]

LAext - Variable in class org.simBio.bio.terashima_et_al_2006.experiment.TonicityChange

concentration of extracellular large anionic compound [mM]

LAext - Variable in class org.simBio.bio.terashima_et_al_2006.function.Tonicity

concentration of extracellular large anionic compound [mM]

LAinitial - Variable in class org.simBio.bio.terashima_et_al_2006.experiment.TonicityChange

concentration of initial extracellular large anionic compound [mM]

LAint - Variable in class org.simBio.bio.terashima_et_al_2006.complex.WaterFlux

concentration of intracellular large anionic compound [mM]

Languages - Class in org.simBio.util.taglets

Abstract super class for languages inline taglets.

Languages() - Constructor for class org.simBio.util.taglets.Languages

lap() - Method in class org.simBio.sim.analyzer.StopWatch

lapTime - Variable in class org.simBio.sim.analyzer.StopWatch

LChange - Class in org.simBio.bio.negroni_lascano_1996.exp

muscle length is set with the controlled step and duration

LChange() - Constructor for class org.simBio.bio.negroni_lascano_1996.exp.LChange

LeadPotential - Class in org.simBio.sim.analyzer.measure

Calculate Lead Potential.

LeadPotential() - Constructor for class org.simBio.sim.analyzer.measure.LeadPotential

leak - Variable in class org.simBio.bio.faber_rudy_2000.structure.NSR

Leak - Variable in class org.simBio.bio.kurata_et_al_2005.complex.SR

Leak - Class in org.simBio.bio.kurata_et_al_2005.flux

leak flux (J_leak) from the uptake site of SR_net (mM/ms).

Leak() - Constructor for class org.simBio.bio.kurata_et_al_2005.flux.Leak

Leak - Class in org.simBio.bio.tenTusscher_et_al_2004.flux

Leakage flux from the SR to cytoplasm.

Leak() - Constructor for class org.simBio.bio.tenTusscher_et_al_2004.flux.Leak

leakage_current_g_L - Variable in class org.simBio.bio.cor.Hodgkin_huxley_squid_axon_1952_modified

leakage_current_g_L (milliS_per_cm2).

legend - Variable in class org.simBio.sim.analyzer.graph.plot.AbstractPlot

length - Variable in class org.simBio.bio.faber_rudy_2000.structure.Cell

length - Variable in class org.simBio.sim.analyzer.graph.Axis

origin location & Length (0.01mm)

length - Variable in class org.simBio.sim.analyzer.graph.simple.Axis

ligand - Variable in class org.simBio.bio.oka_et_al_2006.function.kinetics.MultiStateModel

ligand concentration

ligand - Variable in class org.simBio.bio.oka_et_al_2006.function.kinetics.TwoStateModel

ligand concentration

LightChain - Variable in class org.simBio.bio.noble_et_al_1998.Model

Limitter - Class in org.simBio.sim.analyzer.measure

targetの値が設定値を超えたら計算を終了する。

Limitter() - Constructor for class org.simBio.sim.analyzer.measure.Limitter

Link - Class in org.simBio.core

making Link

Link() - Constructor for class org.simBio.core.Link

ListExchanger - Class in org.simBio.sim.dm.exchange

値をリストに従って変更する

ListExchanger(Node) - Constructor for class org.simBio.sim.dm.exchange.ListExchanger

loadCache(CachedBuffer.ReadCache, long, long) - Method in class org.simBio.sim.analyzer.graph.results.CachedBuffer

キャッシュにデータを読み込む

loadCacheSub(CachedBuffer.ReadCache, long, long, int) - Method in class org.simBio.sim.analyzer.graph.results.CachedBuffer

キャッシュにデータを読み込む（内部メソッド）

loadProc(String) - Method in class org.simBio.sim.gui.toolKit.SimpleGUIFrameWork

ファイルの読み込み処理を行う

log - Static variable in class org.simBio.sim.analyzer.graph.AbstractGraph

log - Static variable in class org.simBio.sim.analyzer.graph.Axis

log - Static variable in class org.simBio.sim.analyzer.graph.RelationGraph

log - Static variable in class org.simBio.sim.analyzer.graph.results.TimeSeriesValues

log - Static variable in class org.simBio.sim.analyzer.graph.Viewer

log - Static variable in class org.simBio.sim.gui.PrintGraph

Log10(double) - Static method in class org.simBio.sim.analyzer.graph.Axis

Calculates a base 10 logarithm

LOG_ERROR - Static variable in class org.simBio.tools.remote.RemoteConstant

log level "error"

LOG_INFO - Static variable in class org.simBio.tools.remote.RemoteConstant

log level "info"

LOG_WARN - Static variable in class org.simBio.tools.remote.RemoteConstant

log level "warn"

logIndented(String) - Method in class org.simBio.core.Component

Deprecated. Use getIndentedShortName() and org.apache.commons.logging.Log instead

logIndented() - Method in class org.simBio.core.VariableList

log all Euler's indented name
全てのVariableの名前をログに書き出す。

LogRatioExchanger - Class in org.simBio.sim.dm.exchange

対数グラフにおいて、等間隔となる値を設定するExchanger

LogRatioExchanger() - Constructor for class org.simBio.sim.dm.exchange.LogRatioExchanger

LogSax2 - Class in org.simBio.serialize.xml

Logging SAX2 events.

LogSax2() - Constructor for class org.simBio.serialize.xml.LogSax2

LR - Variable in class org.simBio.bio.kuzumoto_et_al_2007.molecule.BetaAR_Gs

ligand-receptor complex concentration

LRG - Variable in class org.simBio.bio.kuzumoto_et_al_2007.molecule.BetaAR_Gs

ligand-receptor-gs_protein complex concentration

LUdecomposition - Class in org.simBio.util.numerical.methods

This class provides LU decomposition method to solve system of linear equations.