org.simBio.bio.negroni_lascano_1996.exp
Class Model

java.lang.Object
  org.simBio.core.Component
      org.simBio.core.Parameter
          org.simBio.core.Composite
              org.simBio.core.Reactor
                  org.simBio.bio.negroni_lascano_1996.exp.Model

All Implemented Interfaces:

Node

public class Model
extends Reactor

Cardiac Muscle Model by Negroni and Lascano.

Version:

$Log: Model.java,v $ Revision 1.1 2005/11/01 06:32:39 mikaelwing First version of simBio hosted on sourceforge, version 0.3 Revision 1.1 2005/09/12 04:57:21 sarai rearrenge folder structure as a Maven style Revision 1.3 2005/08/04 07:13:45 sarai merge with branch dev_terashima_et_al_2005 Revision 1.2 2005/06/15 02:13:59 sarai revised javadoc
2005/06/06 06:13:17 put a DOI link to the paper
2005/05/12 03:09:24 moved to exp package
2005/02/08 08:44:44 created.

Author:

Sarai

See Also:

Negroni JA and Lascano EC, J Mol Cell Cardiol 28: 915-929, 1996. XML example explanation

Field Summary

double	A
double	B
double	bias
Node	Ca
Node	Fb
Node	Fp
double	hc
double	K
Node	L
double	L0
double	La
double	R
Node	TCa
Node	TCaCB
Node	TCB
double	Tt
Node	X
double	Y1
double	Y2
double	Y3
double	Y4
double	Yd
double	Z1
double	Z2
double	Z3

Fields inherited from class org.simBio.core.Parameter

value

Constructor Summary

Model()

Method Summary

protected void

calculate(double t) write equations here, and calculate dy over dt.

Methods inherited from class org.simBio.core.Composite

accept, getLink, getNode, getNodesIterator, getNodesSize

Methods inherited from class org.simBio.core.Parameter

addValue, getValue, getValueString, prepare, setInitializer, setValue, setValueString, setValueToField

Methods inherited from class org.simBio.core.Component

addDydt, end, getIndent, getIndentedShortName, getName, getName, getParent, getRoot, getShortName, getUnits, isNamed, isPrefixed, logIndented, quit, setLinks

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface org.simBio.core.Node

addDydt, addValue, getValue, setValue

Field Detail

bias

public double bias

Y1

public double Y1

Z1

public double Z1

Y2

public double Y2

Z2

public double Z2

Y3

public double Y3

Z3

public double Z3

Y4

public double Y4

Yd

public double Yd

Tt

public double Tt

B

public double B

hc

public double hc

La

public double La

L0

public double L0

K

public double K

A

public double A

R

public double R

L

public Node L

Fp

public Node Fp

Fb

public Node Fb

Ca

public Node Ca

TCa

public Node TCa

TCaCB

public Node TCaCB

TCB

public Node TCB

X

public Node X

Constructor Detail

Model

public Model()

Method Detail

calculate

protected void calculate(double t)

Description copied from class: Reactor

write equations here, and calculate dy over dt.
計算中に呼び出される。 計算式を記載する。dy/dtをここで計算する。

Specified by:

calculate in class Reactor

Parameters:

t - elapsed time (ms)