org.simBio.bio.noble_et_al_1998
Class Model

java.lang.Object
  org.simBio.core.Component
      org.simBio.core.Parameter
          org.simBio.core.Composite
              org.simBio.core.Reactor
                  org.simBio.bio.noble_et_al_1998.Model

All Implemented Interfaces:

Node

public class Model
extends Reactor

Noble98 Guinea-Pig Ventricular Cell Model by courtesy of Penny Noble.

Noble D, Varghese A, Kohl P, Noble P.
Improved guinea-pig ventricular cell model incorporating a diadic space, IKr and IKs, and length- and tension-dependent processes.
Can J Cardiol. 1998 Jan;14(1):123-34.

Author:

Nobuaki Sarai

See Also:

Noble et al, 1998

Field Summary

Node	CaCalmod
Node	Cads
Node	Cai
Node	Carel
Node	CaTrop
Node	Caup
Node	CrossBridge
Node	d
Node	E
Node	f
Node	f2
Node	f2ds
Node	FrAct
Node	FrProd
Node	h
Node	ICaL
Node	IKr
Node	IKs
Node	Istim
Node	Ki
Node	Ko
Node	LightChain
Node	m
Node	Nai
double	period
Node	r
Node	s
Node	Tension
Node	xr1
Node	xr2
Node	xs

Fields inherited from class org.simBio.core.Parameter

value

Constructor Summary

Model()

Method Summary

protected void

calculate(double t) write equations here, and calculate dy over dt.

Methods inherited from class org.simBio.core.Composite

accept, getLink, getNode, getNodesIterator, getNodesSize

Methods inherited from class org.simBio.core.Parameter

addValue, getValue, getValueString, prepare, setInitializer, setValue, setValueString, setValueToField

Methods inherited from class org.simBio.core.Component

addDydt, end, getIndent, getIndentedShortName, getName, getName, getParent, getRoot, getShortName, getUnits, isNamed, isPrefixed, logIndented, quit, setLinks

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface org.simBio.core.Node

addDydt, addValue, getValue, setValue

Field Detail

Ko

public Node Ko

E

public Node E

Ki

public Node Ki

Nai

public Node Nai

Cai

public Node Cai

Cads

public Node Cads

Caup

public Node Caup

Carel

public Node Carel

FrAct

public Node FrAct

FrProd

public Node FrProd

CaCalmod

public Node CaCalmod

CaTrop

public Node CaTrop

LightChain

public Node LightChain

CrossBridge

public Node CrossBridge

xr1

public Node xr1

xr2

public Node xr2

xs

public Node xs

r

public Node r

s

public Node s

m

public Node m

h

public Node h

d

public Node d

f

public Node f

f2

public Node f2

f2ds

public Node f2ds

Istim

public Node Istim

ICaL

public Node ICaL

IKr

public Node IKr

IKs

public Node IKs

Tension

public Node Tension

period

public double period

Constructor Detail

Model

public Model()

Method Detail

calculate

protected void calculate(double t)

Description copied from class: Reactor

write equations here, and calculate dy over dt.
計算中に呼び出される。 計算式を記載する。dy/dtをここで計算する。

Specified by:

calculate in class Reactor

Parameters:

t - elapsed time (ms)