org.simBio.bio.kurata_et_al_2005.complex
Class SR

java.lang.Object
  extended by org.simBio.core.Component
      extended by org.simBio.core.Parameter
          extended by org.simBio.core.Composite
              extended by org.simBio.core.Reactor
                  extended by org.simBio.bio.kurata_et_al_2005.complex.SR
All Implemented Interfaces:
Node

public class SR
extends Reactor

Author:
Di

Field Summary
 Node Cai
           
 Node CarelTotal
           
 Node Caup
           
 Node Leak
           
 Node Release
           
 Node Transfer
           
 Node UpTake
           
 double Vi
           
 double Vrel
           
 double Vup
           
 
Fields inherited from class org.simBio.core.Parameter
value
 
Constructor Summary
SR()
           
 
Method Summary
protected  void calculate(double t)
          convert current (pA) to d[X]/dt (mM)
 
Methods inherited from class org.simBio.core.Composite
accept, getLink, getNode, getNodesIterator, getNodesSize
 
Methods inherited from class org.simBio.core.Parameter
addValue, getValue, getValueString, prepare, setInitializer, setValue, setValueString, setValueToField
 
Methods inherited from class org.simBio.core.Component
addDydt, end, getIndent, getIndentedShortName, getName, getName, getParent, getRoot, getShortName, getUnits, isNamed, isPrefixed, logIndented, quit, setLinks
 
Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait
 
Methods inherited from interface org.simBio.core.Node
addDydt, addValue, getValue, setValue
 

Field Detail

Vi

public double Vi

Vrel

public double Vrel

Vup

public double Vup

Leak

public Node Leak

UpTake

public Node UpTake

Release

public Node Release

Transfer

public Node Transfer

Cai

public Node Cai

CarelTotal

public Node CarelTotal

Caup

public Node Caup
Constructor Detail

SR

public SR()
Method Detail

calculate

protected void calculate(double t)
convert current (pA) to d[X]/dt (mM)

Specified by:
calculate in class Reactor
Parameters:
t - elapsed time (ms)
See Also:
Reactor.calculate(double)


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