org.simBio.bio.terashima_et_al_2006.experiment
Class TonicityChange

java.lang.Object
  org.simBio.core.Component
      org.simBio.core.Parameter
          org.simBio.core.Composite
              org.simBio.core.Reactor
                  org.simBio.bio.terashima_et_al_2006.experiment.TonicityChange

All Implemented Interfaces:

Node

public class TonicityChange
extends Reactor

Change extracellular fluid tonicity

Version:

$Log: TonicityChange.java,v $ Revision 1.1 2005/11/01 06:32:39 mikaelwing First version of simBio hosted on sourceforge, version 0.3 Revision 1.1 2005/10/17 07:53:05 mikael Moved from branch dev_terashima_et_al_2005 Revision 1.1.2.3 2005/07/01 12:21:55 sarai revised Javadoc
Revision 1.1.2.2 2005/06/17 01:41:07 takeuchi The javadoc comments are revised.

Author:

Keisuke Terashima

Field Summary

Node	Caext concentration of extracellular Ca2+ [mM]
Node	Cainitial concentration of initial extracellular Ca2+ [mM]
Node	Clext concentration of extracellular Cl- [mM]
Node	Clinitial concentration of initial extracellular Cl- [mM]
Node	elapsedTime
Node	Kext concentration of extracellular K+ [mM]
Node	Kinitial concentration of initial extracellular K+ [mM]
Node	LAext concentration of extracellular large anionic compound [mM]
Node	LAinitial concentration of initial extracellular large anionic compound [mM]
Node	Naext concentration of extracellular Na+ [mM]
Node	Nainitial concentration of initial extracellular Na+ [mM]
double	offsetTime
double	onsetTime
double	Tchange tonicity to change

Fields inherited from class org.simBio.core.Parameter

value

Constructor Summary

TonicityChange()

Method Summary

protected void	calculate(double t) write equations here, and calculate dy over dt.
protected void	prepare() 親が自分と同じ名前のpublic doubleを持っていれば、自分の値を設定する。

Methods inherited from class org.simBio.core.Composite

accept, getLink, getNode, getNodesIterator, getNodesSize

Methods inherited from class org.simBio.core.Parameter

addValue, getValue, getValueString, setInitializer, setValue, setValueString, setValueToField

Methods inherited from class org.simBio.core.Component

addDydt, end, getIndent, getIndentedShortName, getName, getName, getParent, getRoot, getShortName, getUnits, isNamed, isPrefixed, logIndented, quit, setLinks

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface org.simBio.core.Node

addDydt, addValue, getValue, setValue

Field Detail

elapsedTime

public Node elapsedTime

Naext

public Node Naext

concentration of extracellular Na+ [mM]

Kext

public Node Kext

concentration of extracellular K+ [mM]

Caext

public Node Caext

concentration of extracellular Ca2+ [mM]

Clext

public Node Clext

concentration of extracellular Cl- [mM]

LAext

public Node LAext

concentration of extracellular large anionic compound [mM]

Nainitial

public Node Nainitial

concentration of initial extracellular Na+ [mM]

Kinitial

public Node Kinitial

concentration of initial extracellular K+ [mM]

Cainitial

public Node Cainitial

concentration of initial extracellular Ca2+ [mM]

Clinitial

public Node Clinitial

concentration of initial extracellular Cl- [mM]

LAinitial

public Node LAinitial

concentration of initial extracellular large anionic compound [mM]

Tchange

public double Tchange

tonicity to change

onsetTime

public double onsetTime

offsetTime

public double offsetTime

Constructor Detail

TonicityChange

public TonicityChange()

Method Detail

prepare

protected void prepare()

Description copied from class: Parameter

親が自分と同じ名前のpublic doubleを持っていれば、自分の値を設定する。

Overrides:

prepare in class Parameter

See Also:

Component.prepare()

calculate

protected void calculate(double t)

Description copied from class: Reactor

write equations here, and calculate dy over dt.
計算中に呼び出される。 計算式を記載する。dy/dtをここで計算する。

Specified by:

calculate in class Reactor

Parameters:

t - elapsed time (ms)