org.simBio.bio.matsuoka_et_al_2004.function.chemical
Class FCCP

java.lang.Object
  org.simBio.core.Component
      org.simBio.core.Parameter
          org.simBio.core.Composite
              org.simBio.core.Reactor
                  org.simBio.bio.matsuoka_et_al_2004.function.chemical.FCCP

All Implemented Interfaces:

Node

public class FCCP
extends Reactor

effect of FCCP addition.

  kLK1 = kLK1_initial * (1 + 10000*[FCCP]/([FCCP] + 0.0001))
 

Since:

rc20

Version:

$Log: FCCP.java,v $ Revision 1.1 2005/11/01 06:32:40 mikaelwing First version of simBio hosted on sourceforge, version 0.3 Revision 1.1 2005/09/12 04:57:37 sarai rearrenge folder structure as a Maven style Revision 1.2 2005/08/04 08:43:05 sarai revise Javadoc to suppress Warnings
2005/02/01 08:52:41 Some comments were updated to make Javadoc.
2004/12/17 05:43:03 update
2004/09/29 04:10:02 Created

Author:

SAITO Ryuta

See Also:

XML example
explanation (Japanese, WORD doc)

Field Summary

Node	FCCP FCCP concentration
double	initial rate constant of proton leak

Fields inherited from class org.simBio.core.Parameter

value

Constructor Summary

FCCP()

Method Summary

protected void

calculate(double t) write equations here, and calculate dy over dt.

Methods inherited from class org.simBio.core.Composite

accept, getLink, getNode, getNodesIterator, getNodesSize

Methods inherited from class org.simBio.core.Parameter

addValue, getValue, getValueString, prepare, setInitializer, setValue, setValueString, setValueToField

Methods inherited from class org.simBio.core.Component

addDydt, end, getIndent, getIndentedShortName, getName, getName, getParent, getRoot, getShortName, getUnits, isNamed, isPrefixed, logIndented, quit, setLinks

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface org.simBio.core.Node

addDydt, addValue, getValue, setValue

Field Detail

initial

public double initial

rate constant of proton leak

FCCP

public Node FCCP

FCCP concentration

Constructor Detail

FCCP

public FCCP()

Method Detail

calculate

protected void calculate(double t)

Description copied from class: Reactor

write equations here, and calculate dy over dt.
計算中に呼び出される。 計算式を記載する。dy/dtをここで計算する。

Specified by:

calculate in class Reactor

Parameters:

t - elapsed time (ms)