Uses of Class
org.simBio.core.Analyzer

Packages that use Analyzer

org.simBio.sim.analyzer	analyzers which inherit core.Analyzer, core.Analyserを継承するクラス群
org.simBio.sim.analyzer.csv	CSV maker 計算結果をCSV形式で書き出します。
org.simBio.sim.analyzer.csv.keep
org.simBio.sim.analyzer.csv.result
org.simBio.sim.analyzer.graph
org.simBio.sim.analyzer.graph.simple	2D Graph maker 計算結果を2次元グラフで表示する。
org.simBio.sim.analyzer.measure

Uses of Analyzer in org.simBio.sim.analyzer

Subclasses of Analyzer in org.simBio.sim.analyzer

class	StopWatch
class	VisualizeAnalyzer base class for visualized Node(Viewer, Graph, Axis).

Uses of Analyzer in org.simBio.sim.analyzer.csv

Subclasses of Analyzer in org.simBio.sim.analyzer.csv

class	CsvMaker Writes values to a file in csv format. If a directory which does not exist is included in the file path, the directory is created.
class	Siblings should be placed into the xml file of the parent node from which one wants to get the childrens' parameters 親Reactorの持つ全てのVariableとReactorの値をcsv形式で書き出す
class	Total writes values of all parameters, variables and nodes to csv file 親Reactor以下のTreeに存在する全てのReactorとParameterの値をcsv fileに書き出す

Uses of Analyzer in org.simBio.sim.analyzer.csv.keep

Subclasses of Analyzer in org.simBio.sim.analyzer.csv.keep

class	ParamEvalKeeper Keep changing parameters and evaluaion values and write to csv.
class	TimeSeriesKeeper Keep time series data and write to csv.

Uses of Analyzer in org.simBio.sim.analyzer.csv.result

Subclasses of Analyzer in org.simBio.sim.analyzer.csv.result

class	AbstractAppender append the parameters to CSV file at the end of calculation.
class	ALaCarte writes only chosen parameters, variables and nodes to csv file One has to write targets of desirable parameters in the xml file 特定のパラメータをCsvに書き込むクラス。 "target " + numberとして書き出したいNodeを設定して下さい。

Uses of Analyzer in org.simBio.sim.analyzer.graph

Subclasses of Analyzer in org.simBio.sim.analyzer.graph

class	AbstractGraph Provides a Graph framework. Constructs a framework in this class so that the Graph class which inherits from it can be implemented simply, without providing redrawing functions etc.
class	AxisXLog x axis by log scale.
class	AxisYLog y axis by log scale.
class	BasicGraph Graph which displays time series data.

Uses of Analyzer in org.simBio.sim.analyzer.graph.simple

Subclasses of Analyzer in org.simBio.sim.analyzer.graph.simple

class	Axis
class	AxisX x axis
class	AxisXFix
class	AxisY y axis
class	Graph 2D graph.
class	Graph4State
class	RateGraph sample graph for bio.function
class	RateGraph_KA sample graph for bio.function
class	RelationGraph 2D graph of relation between two parameters
class	RelationGraph_LP 2D graph of relation between two parameters for org.simBio.sim.analyzer.measure.LeadPotential.
class	StepChart targetをずらして表示する。
class	Viewer graph viewer.

Uses of Analyzer in org.simBio.sim.analyzer.measure

Subclasses of Analyzer in org.simBio.sim.analyzer.measure

class	AbstractMeasure Measuring.
class	Amplitude get the difference between the maximum and minimum value of the target.
class	AmplitudeInCycle get the difference between the maximum and minimum value of the target in a cycle.
class	APD Measuring Action Potential Duration.
class	APDforSA ペースメーカモデルの活動電位持続時間を計測する。 閾値はmVで指定する。
class	APDforSA2 ペースメーカモデルの活動電位持続時間を計測する。 閾値はAPAのパーセントで指定する。
class	HR 心拍数を計測する。
class	LeadPotential Calculate Lead Potential.
class	Limitter targetの値が設定値を超えたら計算を終了する。
class	PeakDetect
class	Sum targetsの和を求める。
class	Vmax Measuring dV/dt max.
class	VmaxTime measure Vmax and timing of Vmax.