simBio Plugin Function
Running a Simulation with the GUI
When you select and right-click on an XML model for simBio, and click on [simBio]->[Run model], a simulation will run with the GUI.
![popup menu for a simBio model XML](images/specification/RunModel.png)
When you run it once the startup settings will be saved, so from the second time you can run it from the CoolBar.
![starting with the previous session's settings from the CoolBar](images/chapter2/2-1-03_Coolbar.png)
Or you can start with the previous session's settings from the [Run] menu.
![start with the previous session's settings from the menu](images/chapter2/2-1-04_Menu.png)
Changing Model Parameters
When you select/right click on a protocol XML, and click on [simBio]->[Run model], it will run with ResultGenerator.
Building and Running a Model
When you select/right click on an XML construction model for Composer, and click on [simBio]->[Run model], a model XML will be built and run with the GUI. After the execution of the program, a composed.xml file is created, so please refresh the folder.
Run model in simBio_JavaSpaces
To start executing a model in simBio_JavaSpaces, first select a XML-file and then open the pop-up menu [simBio]->[Run model on JavaSpaces], as shown in the figure below.
![popup menu for a simBio model XML](images/specification/RunModelJavaSpaces.png)
Generate XML
When you select and right click on Reactor or Analyzer, and click on [simBio]->[generate XML], an XML file will be generated.
![popup menu for a simBio model Java class](images/chapter4/4-5-01_generateXML.png)