org.simBio.bio.terashima_et_al_2006.current.potassium
Class IKr

java.lang.Object
  org.simBio.core.Component
      org.simBio.core.Parameter
          org.simBio.core.Composite
              org.simBio.core.Reactor
                  org.simBio.bio.matsuoka_et_al_2003.current.MembraneTransporter
                      org.simBio.bio.terashima_et_al_2006.current.MembraneTransporter
                          org.simBio.bio.terashima_et_al_2006.current.potassium.PureKchannel
                              org.simBio.bio.terashima_et_al_2006.current.potassium.IKr

All Implemented Interfaces:

Node

public class IKr
extends PureKchannel

Delayed rectifier K⁺ current channel.

  d gate / dt = alpha * (1 - gate) - beta * gate
  pOpen = (0.6 * gate1 + 0.4 * gate2) * gate3
 

Version:

$Id: IKr.java,v 1.3 2007/12/19 06:02:40 nsarai Exp $

Author:

Nobuaki Sarai

See Also:

IKr

Field Summary

Node	gate1 activation gating variable (the rapid component)
Node	gate2 activation gating variable (the slow component)
Node	gate3 inactivation gating variable
Node	POpen

Fields inherited from class org.simBio.bio.terashima_et_al_2006.current.potassium.PureKchannel

Cm, permeabilityK, pOpen, reversalPotential, Vm

Fields inherited from class org.simBio.bio.terashima_et_al_2006.current.MembraneTransporter

cCl, CCl, currentCl

Fields inherited from class org.simBio.bio.matsuoka_et_al_2003.current.MembraneTransporter

cCa, CCa, cK, CK, cNa, CNa, current, currentCa, currentK, currentNa, total

Fields inherited from class org.simBio.core.Parameter

value

Constructor Summary

IKr()

Method Summary

protected void

calculate(double t) Calculate current

Methods inherited from class org.simBio.bio.matsuoka_et_al_2003.current.MembraneTransporter

prepare

Methods inherited from class org.simBio.core.Composite

accept, getLink, getNode, getNodesIterator, getNodesSize

Methods inherited from class org.simBio.core.Parameter

addValue, getValue, getValueString, setInitializer, setValue, setValueString, setValueToField

Methods inherited from class org.simBio.core.Component

addDydt, end, getIndent, getIndentedShortName, getName, getName, getParent, getRoot, getShortName, getUnits, isNamed, isPrefixed, logIndented, quit, setLinks

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface org.simBio.core.Node

addDydt, addValue, getValue, setValue

Field Detail

gate1

public Node gate1

activation gating variable (the rapid component)

gate2

public Node gate2

activation gating variable (the slow component)

gate3

public Node gate3

inactivation gating variable

POpen

public Node POpen

Constructor Detail

IKr

public IKr()

Method Detail

calculate

protected void calculate(double t)

Calculate current

Overrides:

calculate in class PureKchannel

Parameters:

t - time