org.simBio.bio.terashima_et_al_2006.current.cf
Class IVRCC

java.lang.Object
  org.simBio.core.Component
      org.simBio.core.Parameter
          org.simBio.core.Composite
              org.simBio.core.Reactor
                  org.simBio.bio.matsuoka_et_al_2003.current.MembraneTransporter
                      org.simBio.bio.terashima_et_al_2006.current.MembraneTransporter
                          org.simBio.bio.terashima_et_al_2006.current.cf.CfChannel
                              org.simBio.bio.terashima_et_al_2006.current.cf.IVRCC

All Implemented Interfaces:

Node

public class IVRCC
extends CfChannel

volume-regulated Cl- current.

Version:

$Log: IVRCC.java,v $ Revision 1.1 2005/11/01 06:32:39 mikaelwing First version of simBio hosted on sourceforge, version 0.3 Revision 1.1 2005/10/17 07:53:03 mikael Moved from branch dev_terashima_et_al_2005 Revision 1.1.2.7 2005/07/01 11:55:43 sarai revised Javadoc
Revision 1.1.2.5 2005/07/01 01:40:16 sarai put links
2005/06/30 09:20:30 sarai put link to example xml
2005/06/30 09:02:41 sarai Vt instead of Vi is used
2005/06/17 01:03:24 takeuchi The javadoc comments are revised.
2005/2/5 Takeuchi change permeability from double to Node, it can work in both Type

Author:

Keisuke Terashima

See Also:

IVRCC.ja.doc (Japanese, WORD doc) IVRCC.xml Strieter et al, 1990 Shuba et al, 1996

Field Summary

double	compliance compliance of membrane
double	halfMaxVm factor to define voltage-dependence of IVRCC [mV]
double	halfMaxVt cell volume at which the change in Cl- conductance is half of its maximum value [um^3]
double	maxFactor factor to define maximum VRCC activation by swelling
Node	permeabilityCl converting factor for IVRCC [pA/pF/mM]
double	slope slope
Node	Vm membrane potential [mV]
Node	Vt intracellular volume [um^3]

Fields inherited from class org.simBio.bio.terashima_et_al_2006.current.cf.CfChannel

Cm, constantFieldCa, constantFieldCl, constantFieldK, constantFieldNa, permeabilityCa, permeabilityK, permeabilityNa, pOpen

Fields inherited from class org.simBio.bio.terashima_et_al_2006.current.MembraneTransporter

cCl, CCl, currentCl

Fields inherited from class org.simBio.bio.matsuoka_et_al_2003.current.MembraneTransporter

cCa, CCa, cK, CK, cNa, CNa, current, currentCa, currentK, currentNa, total

Fields inherited from class org.simBio.core.Parameter

value

Constructor Summary

IVRCC()

Method Summary

protected void

calculate(double t) add Cl current to Compartment.

Methods inherited from class org.simBio.bio.matsuoka_et_al_2003.current.MembraneTransporter

prepare

Methods inherited from class org.simBio.core.Composite

accept, getLink, getNode, getNodesIterator, getNodesSize

Methods inherited from class org.simBio.core.Parameter

addValue, getValue, getValueString, setInitializer, setValue, setValueString, setValueToField

Methods inherited from class org.simBio.core.Component

addDydt, end, getIndent, getIndentedShortName, getName, getName, getParent, getRoot, getShortName, getUnits, isNamed, isPrefixed, logIndented, quit, setLinks

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface org.simBio.core.Node

addDydt, addValue, getValue, setValue

Field Detail

maxFactor

public double maxFactor

factor to define maximum VRCC activation by swelling

compliance

public double compliance

compliance of membrane

halfMaxVt

public double halfMaxVt

cell volume at which the change in Cl- conductance is half of its maximum value [um^3]

slope

public double slope

slope

halfMaxVm

public double halfMaxVm

factor to define voltage-dependence of IVRCC [mV]

permeabilityCl

public Node permeabilityCl

converting factor for IVRCC [pA/pF/mM]

Vm

public Node Vm

membrane potential [mV]

Vt

public Node Vt

intracellular volume [um^3]

Constructor Detail

IVRCC

public IVRCC()

Method Detail

calculate

protected void calculate(double t)

Description copied from class: MembraneTransporter

add Cl current to Compartment.

Overrides:

calculate in class CfChannel

Parameters:

t - time

See Also:

CfChannel.calculate(double)