org.simBio.bio.terashima_et_al_2006.current.carrier
Class INaK

java.lang.Object
  extended by org.simBio.core.Component
      extended by org.simBio.core.Parameter
          extended by org.simBio.core.Composite
              extended by org.simBio.core.Reactor
                  extended by org.simBio.bio.matsuoka_et_al_2003.current.MembraneTransporter
                      extended by org.simBio.bio.matsuoka_et_al_2003.current.carrier.Carrier
                          extended by org.simBio.bio.matsuoka_et_al_2003.current.carrier.INaK
                              extended by org.simBio.bio.terashima_et_al_2006.current.carrier.INaK
All Implemented Interfaces:
Node

public class INaK
extends INaK

Calculate Ouabain effect on amplitude of INaK. apply dose-response relation for ouabain, J.P. 200, 459-496. assume constant concentration of ouabain during calculation.

Version:
$Id: INaK.java,v 1.2 2007/10/18 04:03:14 nsarai Exp $
Author:
Nobuaki Sarai

Field Summary
 double Couabain
          ouabain concentration (mM)
 
Fields inherited from class org.simBio.bio.matsuoka_et_al_2003.current.carrier.INaK
ATP, ATPconsumingRate, ATPconsumption, dATP, dATP_, F, Ki, KmATP, KmKi, KmKo, KmNai, KmNao, Ko, Nai, Nao, nHK, nHNa, R, ramda, T, t0, Vi, Vm
 
Fields inherited from class org.simBio.bio.matsuoka_et_al_2003.current.carrier.Carrier
amplitude, Cm, E1A, E1B, E2A, E2B, gate, k1, k2, k3, k4, stoichiometryCa, stoichiometryK, stoichiometryNa
 
Fields inherited from class org.simBio.bio.matsuoka_et_al_2003.current.MembraneTransporter
cCa, CCa, cK, CK, cNa, CNa, current, currentCa, currentK, currentNa, total
 
Fields inherited from class org.simBio.core.Parameter
value
 
Constructor Summary
INaK()
           
 
Method Summary
protected  void end()
          called at the end of integration,
計算終了時に呼ばれます。
protected  void prepare()
          construct null current
 
Methods inherited from class org.simBio.bio.matsuoka_et_al_2003.current.carrier.INaK
calculate
 
Methods inherited from class org.simBio.core.Composite
accept, getLink, getNode, getNodesIterator, getNodesSize
 
Methods inherited from class org.simBio.core.Parameter
addValue, getValue, getValueString, setInitializer, setValue, setValueString, setValueToField
 
Methods inherited from class org.simBio.core.Component
addDydt, getIndent, getIndentedShortName, getName, getName, getParent, getRoot, getShortName, getUnits, isNamed, isPrefixed, logIndented, quit, setLinks
 
Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait
 
Methods inherited from interface org.simBio.core.Node
addDydt, addValue, getValue, setValue
 

Field Detail

Couabain

public double Couabain
ouabain concentration (mM)

Constructor Detail

INaK

public INaK()
Method Detail

prepare

protected void prepare()
Description copied from class: MembraneTransporter
construct null current

Overrides:
prepare in class INaK
See Also:
Component.prepare()

end

protected void end()
Description copied from class: Component
called at the end of integration,
計算終了時に呼ばれます。

Overrides:
end in class Component


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