|
||||||||||
PREV CLASS NEXT CLASS | FRAMES NO FRAMES | |||||||||
SUMMARY: NESTED | FIELD | CONSTR | METHOD | DETAIL: FIELD | CONSTR | METHOD |
java.lang.Object org.simBio.core.Component org.simBio.core.Parameter org.simBio.core.Composite org.simBio.core.Reactor org.simBio.bio.matsuoka_et_al_2003.current.MembraneTransporter org.simBio.bio.takeuchi_et_al_2006.current.IRyR
public class IRyR
Calcium releasing channel on SR. k1 depends on iCaL only, which is different from the model of Matsuoka et al, 2003.
Field Summary | |
---|---|
Node |
CaDiadic
local Ca2+ concentration near the mouth of RyR channel |
Node |
Cai
intracellular calcium concentration (mM) |
Node |
Carel
calcium concentration in SR rel (mM) |
Node |
close
close state probability |
double |
Cm
membrane capacitance (pF) |
double |
diadicFactor
Ca diadicFactor |
Node |
open
open state probability |
double |
permeabilityCa
membrane permeability |
Fields inherited from class org.simBio.bio.matsuoka_et_al_2003.current.MembraneTransporter |
---|
cCa, CCa, cK, CK, cNa, CNa, current, currentCa, currentK, currentNa, total |
Fields inherited from class org.simBio.core.Parameter |
---|
value |
Constructor Summary | |
---|---|
IRyR()
|
Method Summary | |
---|---|
protected void |
calculate(double t)
add current to Compartment. |
protected void |
prepare()
construct null current |
Methods inherited from class org.simBio.core.Composite |
---|
accept, getLink, getNode, getNodesIterator, getNodesSize |
Methods inherited from class org.simBio.core.Parameter |
---|
addValue, getValue, getValueString, setInitializer, setValue, setValueString, setValueToField |
Methods inherited from class org.simBio.core.Component |
---|
addDydt, end, getIndent, getIndentedShortName, getName, getName, getParent, getRoot, getShortName, getUnits, isNamed, isPrefixed, logIndented, quit, setLinks |
Methods inherited from class java.lang.Object |
---|
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait |
Methods inherited from interface org.simBio.core.Node |
---|
addDydt, addValue, getValue, setValue |
Field Detail |
---|
public Node open
public Node close
public Node Cai
public Node Carel
public Node CaDiadic
public double diadicFactor
public double permeabilityCa
public double Cm
Constructor Detail |
---|
public IRyR()
Method Detail |
---|
protected void calculate(double t)
MembraneTransporter
calculate
in class MembraneTransporter
t
- timeprotected void prepare()
MembraneTransporter
prepare
in class MembraneTransporter
Component.prepare()
|
||||||||||
PREV CLASS NEXT CLASS | FRAMES NO FRAMES | |||||||||
SUMMARY: NESTED | FIELD | CONSTR | METHOD | DETAIL: FIELD | CONSTR | METHOD |