org.simBio.bio.sarai_et_al_2003
Class VoltageClamp

java.lang.Object
  org.simBio.core.Component
      org.simBio.core.Parameter
          org.simBio.core.Composite
              org.simBio.core.Reactor
                  org.simBio.bio.matsuoka_et_al_2003.current.MembraneTransporter
                      org.simBio.bio.sarai_et_al_2003.VoltageClamp

All Implemented Interfaces:

Node

public final class VoltageClamp
extends MembraneTransporter

Voltage clamp.

Version:

$Id: VoltageClamp.java,v 1.1 2007/10/31 07:07:20 nsarai Exp $

Author:

Sarai

See Also:

put reference here

Field Summary

double	Cm membrane capacitance (pF)
double	delta time, which is needed to make Vm holding potential (ms)
double	holding holding potential (mV)
Node	observedCurrent total current through the cell membrane (pA)
double	onset onset (msec) of the clump
Node	Vm membrane potential (mV)

Fields inherited from class org.simBio.bio.matsuoka_et_al_2003.current.MembraneTransporter

cCa, CCa, cK, CK, cNa, CNa, current, currentCa, currentK, currentNa, total

Fields inherited from class org.simBio.core.Parameter

value

Constructor Summary

VoltageClamp()

Method Summary

protected void	calculate(double t) SA nodeモデルでVmが設定値になったらVoltage Clampを開始する。
protected void	prepare() construct null current

Methods inherited from class org.simBio.core.Composite

accept, getLink, getNode, getNodesIterator, getNodesSize

Methods inherited from class org.simBio.core.Parameter

addValue, getValue, getValueString, setInitializer, setValue, setValueString, setValueToField

Methods inherited from class org.simBio.core.Component

addDydt, end, getIndent, getIndentedShortName, getName, getName, getParent, getRoot, getShortName, getUnits, isNamed, isPrefixed, logIndented, quit, setLinks

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface org.simBio.core.Node

addDydt, addValue, getValue, setValue

Field Detail

Vm

public Node Vm

membrane potential (mV)

Cm

public double Cm

membrane capacitance (pF)

onset

public double onset

onset (msec) of the clump

holding

public double holding

holding potential (mV)

delta

public double delta

time, which is needed to make Vm holding potential (ms)

observedCurrent

public Node observedCurrent

total current through the cell membrane (pA)

Constructor Detail

VoltageClamp

public VoltageClamp()

Method Detail

calculate

protected final void calculate(double t)

SA nodeモデルでVmが設定値になったらVoltage Clampを開始する。

Overrides:

calculate in class MembraneTransporter

Parameters:

t - time

See Also:

MembraneTransporter.calculate(double)

prepare

protected void prepare()

Description copied from class: MembraneTransporter

construct null current

Overrides:

prepare in class MembraneTransporter

See Also:

Component.prepare()