org.simBio.bio.oka_et_al_2006.function.kinetics
Class IndependentGate

java.lang.Object
  org.simBio.core.Component
      org.simBio.core.Parameter
          org.simBio.core.Composite
              org.simBio.core.Reactor
                  org.simBio.bio.function.Function
                      org.simBio.bio.oka_et_al_2006.function.kinetics.IndependentGate

All Implemented Interfaces:

Node

public class IndependentGate
extends Function

Calculate the mean open probability of the gating model consisting of multiple independent gates.

Version:

$Revision: 1.1 $

Author:

Chiaki Oka

See Also:

IndependentGate.ja.doc (Japanese, WORD doc)

Field Summary

Fields inherited from class org.simBio.core.Parameter

value

Constructor Summary

IndependentGate()

Method Summary

protected void	calculate(double t) Calculate the open probability.
protected void	prepare() 親が自分と同じ名前のpublic doubleを持っていれば、自分の値を設定する。

Methods inherited from class org.simBio.core.Composite

accept, getLink, getNode, getNodesIterator, getNodesSize

Methods inherited from class org.simBio.core.Parameter

addValue, getValue, getValueString, setInitializer, setValue, setValueString, setValueToField

Methods inherited from class org.simBio.core.Component

addDydt, end, getIndent, getIndentedShortName, getName, getName, getParent, getRoot, getShortName, getUnits, isNamed, isPrefixed, logIndented, quit, setLinks

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface org.simBio.core.Node

addDydt, addValue, getValue, setValue

Constructor Detail

IndependentGate

public IndependentGate()

Method Detail

calculate

protected void calculate(double t)

Calculate the open probability.

Specified by:

calculate in class Reactor

Parameters:

t - elapsed time (ms)

See Also:

Reactor.calculate(double)

prepare

protected void prepare()

Description copied from class: Parameter

親が自分と同じ名前のpublic doubleを持っていれば、自分の値を設定する。

Overrides:

prepare in class Parameter

See Also:

Component.prepare()