org.simBio.bio.matsuoka_et_al_2003.molecule.enzyme
Class IsotonicContraction

java.lang.Object
  org.simBio.core.Component
      org.simBio.core.Parameter
          org.simBio.core.Composite
              org.simBio.core.Reactor
                  org.simBio.bio.matsuoka_et_al_2003.molecule.enzyme.CrossBridgeNL
                      org.simBio.bio.matsuoka_et_al_2003.molecule.enzyme.IsotonicContraction

All Implemented Interfaces:

Node

public class IsotonicContraction
extends CrossBridgeNL

Isotonic Contraction

Version:

Created on 2003/05/29

Author:

Sarai

See Also:

XML example,
explanation (WORD doc)

Field Summary

Fields inherited from class org.simBio.bio.matsuoka_et_al_2003.molecule.enzyme.CrossBridgeNL

forceCB, ForceEcomp, forceExt, forceFactor, h, halfsarcomerelength, InextensibleLength, KForceEC, KForceLinearEc, NewCBF, optimumHSL, troponin, ZeroForceEL

Fields inherited from class org.simBio.core.Parameter

value

Constructor Summary

IsotonicContraction()

Method Summary

protected void

calculate(double t) calculate the rate of change in the cross bridge length, dX/dt

Methods inherited from class org.simBio.bio.matsuoka_et_al_2003.molecule.enzyme.CrossBridgeNL

getCBfactor, getEffectiveFraction

Methods inherited from class org.simBio.core.Composite

accept, getLink, getNode, getNodesIterator, getNodesSize

Methods inherited from class org.simBio.core.Parameter

addValue, getValue, getValueString, prepare, setInitializer, setValue, setValueString, setValueToField

Methods inherited from class org.simBio.core.Component

addDydt, end, getIndent, getIndentedShortName, getName, getName, getParent, getRoot, getShortName, getUnits, isNamed, isPrefixed, logIndented, quit, setLinks

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface org.simBio.core.Node

addDydt, addValue, getValue, setValue

Constructor Detail

IsotonicContraction

public IsotonicContraction()

Method Detail

calculate

protected void calculate(double t)

Description copied from class: CrossBridgeNL

calculate the rate of change in the cross bridge length, dX/dt

Overrides:

calculate in class CrossBridgeNL

Parameters:

t - elapsed time (ms)