org.simBio.bio.matsuoka_et_al_2003.function
Class Charge

java.lang.Object
  org.simBio.core.Component
      org.simBio.core.Parameter
          org.simBio.core.Composite
              org.simBio.core.Reactor
                  org.simBio.bio.matsuoka_et_al_2003.function.Charge

All Implemented Interfaces:

IResetBeforeCalc, Node

public class Charge
extends Reactor
implements IResetBeforeCalc

keep whole cell current from external solution. calculates dVm/dt = - I / Cm This class assumes out side potential = 0.

Version:

$Revision: 1.1 $,
Created on 2003/11/22

Author:

Nobuaki Sarai

See Also:

XML example,
explanation (Japanese, WORD doc)

Field Summary

Node	Cm membrane capacitance (pF)
Node	Vm membrane potential (mV)

Fields inherited from class org.simBio.core.Parameter

value

Constructor Summary

Charge()

Method Summary

protected void

calculate(double t) dVm/dt = - I / Cm

Methods inherited from class org.simBio.core.Composite

accept, getLink, getNode, getNodesIterator, getNodesSize

Methods inherited from class org.simBio.core.Parameter

addValue, getValue, getValueString, prepare, setInitializer, setValue, setValueString, setValueToField

Methods inherited from class org.simBio.core.Component

addDydt, end, getIndent, getIndentedShortName, getName, getName, getParent, getRoot, getShortName, getUnits, isNamed, isPrefixed, logIndented, quit, setLinks

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface org.simBio.core.Node

addDydt, addValue, getValue, setValue

Field Detail

Cm

public Node Cm

membrane capacitance (pF)

Vm

public Node Vm

membrane potential (mV)

Constructor Detail

Charge

public Charge()

Method Detail

calculate

protected void calculate(double t)

dVm/dt = - I / Cm

Specified by:

calculate in class Reactor

Parameters:

t - elapsed time (ms)

See Also:

Reactor.calculate(double)