org.simBio.bio.kuzumoto_et_al_2007.contraction
Class Troponinmit

java.lang.Object
  extended by org.simBio.core.Component
      extended by org.simBio.core.Parameter
          extended by org.simBio.core.Composite
              extended by org.simBio.core.Reactor
                  extended by org.simBio.bio.kuzumoto_et_al_2007.contraction.Troponin
                      extended by org.simBio.bio.kuzumoto_et_al_2007.contraction.Troponinmit
All Implemented Interfaces:
Node

public class Troponinmit
extends Troponin

Troponin state transition of Cardiac Muscle Model by Negroni and Lascano. ATP- and Pi-dependency are incorporated.

Version:
$Id: Troponinmit.java,v 1.1 2007/12/15 07:21:54 nsarai Exp $
Author:
SAITO Ryuta
See Also:
Kuzumoto et al, 2007., Negroni JA and Lascano EC, J Mol Cell Cardiol 28: 915-929, 1996.

Field Summary
 Node ADP
           
 double KmATP
           
 double KmPi
           
 Node Pi
           
 
Fields inherited from class org.simBio.bio.kuzumoto_et_al_2007.contraction.Troponin
ATP, BIAS, Ca, CaTotal, dATP, dXdt, dXdtFactor, L, La, r1, r2, T, TCa, TCaCB, TCB, Tt, Y1, Y2, Y3, Y4, Yd, Z1, Z2, Z3
 
Fields inherited from class org.simBio.core.Parameter
value
 
Constructor Summary
Troponinmit()
           
 
Method Summary
protected  void calculate(double t)
          write equations here, and calculate dy over dt.
 
Methods inherited from class org.simBio.core.Composite
accept, getLink, getNode, getNodesIterator, getNodesSize
 
Methods inherited from class org.simBio.core.Parameter
addValue, getValue, getValueString, prepare, setInitializer, setValue, setValueString, setValueToField
 
Methods inherited from class org.simBio.core.Component
addDydt, end, getIndent, getIndentedShortName, getName, getName, getParent, getRoot, getShortName, getUnits, isNamed, isPrefixed, logIndented, quit, setLinks
 
Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait
 
Methods inherited from interface org.simBio.core.Node
addDydt, addValue, getValue, setValue
 

Field Detail

Pi

public Node Pi

ADP

public Node ADP

KmPi

public double KmPi

KmATP

public double KmATP
Constructor Detail

Troponinmit

public Troponinmit()
Method Detail

calculate

protected void calculate(double t)
Description copied from class: Reactor
write equations here, and calculate dy over dt.
計算中に呼び出される。 計算式を記載する。dy/dtをここで計算する。

Overrides:
calculate in class Troponin
Parameters:
t - elapsed time (ms)


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