org.simBio.bio.hodgkin_huxley_1952
Class Membrane

java.lang.Object
  org.simBio.core.Component
      org.simBio.core.Parameter
          org.simBio.core.Composite
              org.simBio.core.Reactor
                  org.simBio.bio.hodgkin_huxley_1952.Membrane

All Implemented Interfaces:

Node

public class Membrane
extends Reactor

Membrane.

Version:

$Revision: 1.4 $

Author:

Nobuaki Sarai

See Also:

"Hodgkin AL, and Huxley AF. A quantitative description of membrane current and its application to conduction and excitation in nerve. J Physiol 117: 500-544, 1952."
XML example

Field Summary

double	Cm membrane capacitance, initial value = 1.0 (microF_per_cm2)
Node	I_K Potassium current (microA_per_cm2)
Node	I_L Leak (Chloride) current (microA_per_cm2)
Node	I_Na Sodium current (microA_per_cm2)
Node	I_stim Stimulus current (microA_per_cm2)
Node	Vm membrane potential, V, initial value = -75.0 (millivolt)

Fields inherited from class org.simBio.core.Parameter

value

Constructor Summary

Membrane()

Method Summary

protected void

calculate(double t) write equations here, and calculate dy over dt.

Methods inherited from class org.simBio.core.Composite

accept, getLink, getNode, getNodesIterator, getNodesSize

Methods inherited from class org.simBio.core.Parameter

addValue, getValue, getValueString, prepare, setInitializer, setValue, setValueString, setValueToField

Methods inherited from class org.simBio.core.Component

addDydt, end, getIndent, getIndentedShortName, getName, getName, getParent, getRoot, getShortName, getUnits, isNamed, isPrefixed, logIndented, quit, setLinks

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface org.simBio.core.Node

addDydt, addValue, getValue, setValue

Field Detail

Vm

public Node Vm

membrane potential, V, initial value = -75.0 (millivolt)

I_Na

public Node I_Na

Sodium current (microA_per_cm2)

I_K

public Node I_K

Potassium current (microA_per_cm2)

I_L

public Node I_L

Leak (Chloride) current (microA_per_cm2)

I_stim

public Node I_stim

Stimulus current (microA_per_cm2)

Cm

public double Cm

membrane capacitance, initial value = 1.0 (microF_per_cm2)

Constructor Detail

Membrane

public Membrane()

Method Detail

calculate

protected void calculate(double t)

Description copied from class: Reactor

write equations here, and calculate dy over dt.
計算中に呼び出される。 計算式を記載する。dy/dtをここで計算する。

Specified by:

calculate in class Reactor

Parameters:

t - elapsed time (ms)