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java.lang.Object org.simBio.core.Component org.simBio.core.Parameter org.simBio.core.Composite org.simBio.core.Reactor org.simBio.bio.matsuoka_et_al_2003.current.MembraneTransporter org.simBio.bio.terashima_et_al_2006.current.MembraneTransporter org.simBio.bio.terashima_et_al_2006.current.cf.CfChannel org.simBio.bio.himeno_et_al_2008.Ist
public class Ist
Sustained inward current for pacemaker model. PKA factor is incorporated.
org.simBio.matsuoka_et_al_2003.current.Ist
Field Summary | |
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Node |
activation
gate variable |
double |
amplitudePKAf
to modulate PKA effect |
Node |
Cai
intracellular calcium concentration (mM) |
Node |
inactivation
gate variable |
double |
max
PKA phosphorylate |
Node |
PKA
PKA catalitic domain I concentration |
double |
PKA0
|
Node |
slowInactivation
gate variable |
Node |
Vm
membrane potential (mV) |
double |
Vshift
a shift of activation potential for 4 state voltage gate |
Fields inherited from class org.simBio.bio.terashima_et_al_2006.current.cf.CfChannel |
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Cm, constantFieldCa, constantFieldCl, constantFieldK, constantFieldNa, permeabilityCa, permeabilityCl, permeabilityK, permeabilityNa, pOpen |
Fields inherited from class org.simBio.bio.terashima_et_al_2006.current.MembraneTransporter |
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cCl, CCl, currentCl |
Fields inherited from class org.simBio.bio.matsuoka_et_al_2003.current.MembraneTransporter |
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cCa, CCa, cK, CK, cNa, CNa, current, currentCa, currentK, currentNa, total |
Fields inherited from class org.simBio.core.Parameter |
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value |
Constructor Summary | |
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Ist()
|
Method Summary | |
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protected void |
calculate(double t)
add Cl current to Compartment. |
Methods inherited from class org.simBio.bio.matsuoka_et_al_2003.current.MembraneTransporter |
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prepare |
Methods inherited from class org.simBio.core.Composite |
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accept, getLink, getNode, getNodesIterator, getNodesSize |
Methods inherited from class org.simBio.core.Parameter |
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addValue, getValue, getValueString, setInitializer, setValue, setValueString, setValueToField |
Methods inherited from class org.simBio.core.Component |
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addDydt, end, getIndent, getIndentedShortName, getName, getName, getParent, getRoot, getShortName, getUnits, isNamed, isPrefixed, logIndented, quit, setLinks |
Methods inherited from class java.lang.Object |
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clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait |
Methods inherited from interface org.simBio.core.Node |
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addDydt, addValue, getValue, setValue |
Field Detail |
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public double max
public Node PKA
public double PKA0
public Node Vm
public Node Cai
public double Vshift
public Node activation
public Node inactivation
public Node slowInactivation
public double amplitudePKAf
Constructor Detail |
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public Ist()
Method Detail |
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protected void calculate(double t)
MembraneTransporter
calculate
in class CfChannel
t
- timeCfChannel.calculate(double)
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