org.simBio.bio.himeno_et_al_2008
Class Iha

java.lang.Object
  extended by org.simBio.core.Component
      extended by org.simBio.core.Parameter
          extended by org.simBio.core.Composite
              extended by org.simBio.core.Reactor
                  extended by org.simBio.bio.matsuoka_et_al_2003.current.MembraneTransporter
                      extended by org.simBio.bio.terashima_et_al_2006.current.MembraneTransporter
                          extended by org.simBio.bio.terashima_et_al_2006.current.cf.CfChannel
                              extended by org.simBio.bio.himeno_et_al_2008.Iha
All Implemented Interfaces:
Node

public class Iha
extends CfChannel

Iha. Cyclic AMP factor is incorporated.

Version:
$Id: Iha.java,v 1.1 2008/02/04 02:22:25 mikaelwing Exp $
Author:
Himeno
See Also:
org.simBio.matsuoka_et_al_2003.current.Iha

Field Summary
 double amplitudecAMPf
          to modulate cAMP effect
 Node cAMP
          cAMP concentration
 Node cAMP_Vshift
           
 double cAMP0
           
 Node closedState1
           
 Node closedState2
           
 Node openState1
           
 Node openState2
           
 Node Vm
           
 
Fields inherited from class org.simBio.bio.terashima_et_al_2006.current.cf.CfChannel
Cm, constantFieldCa, constantFieldCl, constantFieldK, constantFieldNa, permeabilityCa, permeabilityCl, permeabilityK, permeabilityNa, pOpen
 
Fields inherited from class org.simBio.bio.terashima_et_al_2006.current.MembraneTransporter
cCl, CCl, currentCl
 
Fields inherited from class org.simBio.bio.matsuoka_et_al_2003.current.MembraneTransporter
cCa, CCa, cK, CK, cNa, CNa, current, currentCa, currentK, currentNa, total
 
Fields inherited from class org.simBio.core.Parameter
value
 
Constructor Summary
Iha()
           
 
Method Summary
protected  void calculate(double t)
          add Cl current to Compartment.
 
Methods inherited from class org.simBio.bio.matsuoka_et_al_2003.current.MembraneTransporter
prepare
 
Methods inherited from class org.simBio.core.Composite
accept, getLink, getNode, getNodesIterator, getNodesSize
 
Methods inherited from class org.simBio.core.Parameter
addValue, getValue, getValueString, setInitializer, setValue, setValueString, setValueToField
 
Methods inherited from class org.simBio.core.Component
addDydt, end, getIndent, getIndentedShortName, getName, getName, getParent, getRoot, getShortName, getUnits, isNamed, isPrefixed, logIndented, quit, setLinks
 
Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait
 
Methods inherited from interface org.simBio.core.Node
addDydt, addValue, getValue, setValue
 

Field Detail

Vm

public Node Vm

closedState1

public Node closedState1

closedState2

public Node closedState2

openState1

public Node openState1

openState2

public Node openState2

cAMP

public Node cAMP
cAMP concentration


cAMP0

public double cAMP0

amplitudecAMPf

public double amplitudecAMPf
to modulate cAMP effect


cAMP_Vshift

public Node cAMP_Vshift
Constructor Detail

Iha

public Iha()
Method Detail

calculate

protected void calculate(double t)
Description copied from class: MembraneTransporter
add Cl current to Compartment.

Overrides:
calculate in class CfChannel
Parameters:
t - time
See Also:
CfChannel.calculate(double)


Copyright © 2002-2008 Cell/Biodinamics simulation project. All Rights Reserved.